I just want to use map to compare DNA to DNA directly.
Am i going mad or is mmseqs trolling me?
% mmseqs createdb genome.dna query
% mmseqs createdb genes.dna targets
% mmseqs map query targets hits tmp
It is unclear from the input if a translated or nucleotide search should be performed
Please provide the parameter --search-type 2 (translated), 3 (nucleotide) or 4 (translated nucleotide backtrace)
% mmseqs map query targets hits tmp --search-type 3
Unrecognized parameter "--search-type". Did you mean "--target-search-mode" (Target search mode)?
% mmseqs map query targets hits tmp --target-search mode 3
Error in argument --target-search-mode
% mmseqs map query targets hits tmp --target-search mode 0
It is unclear from the input if a translated or nucleotide search should be performed
Please provide the parameter --search-type 2 (translated), 3 (nucleotide) or 4 (translated nucleotide backtrace)
I just want to use
mapto compare DNA to DNA directly.Am i going mad or is
mmseqstrolling me?