chore: Remove progress bar feature

[RobertJacobsonCDC]

Removed the progress bar feature. This deletes the progress API/module, removes the timeline progress update from Context, drops the --timeline-progress-max runner option, and simplifies logging by removing the progress-bar-specific encoder wrapper.

The feature/dependency wiring and runner integration test were removed, and the CLI docs were regenerated so the removed flag no longer appears. The performance docs no longer describe progress bar APIs.

[github-actions]

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
large_sir::baseline	2.9 ± 0.2	2.7	3.9	1.00
large_sir::entities	6.3 ± 0.3	6.1	7.7	2.17 ± 0.16

Criterion

Regressions (slower)

Group	Bench	Param	Change	CI Lower	CI Upper
examples	example-basic-infection		14.306%	13.397%	15.217%
indexing	with_query_results_multiple_individually_indexed_properties_enti		12.199%	11.360%	13.438%
indexing	query_people_single_indexed_property_entities		9.021%	7.971%	10.164%
algorithm_benches	algorithm_sampling_single_known_length		5.704%	4.685%	6.504%
sample_entity	sample_entity_multi_property_indexed	1000	3.936%	3.193%	5.008%
large_dataset	bench_query_population_multi_indexed_entities		3.424%	2.839%	4.165%
indexing	query_people_indexed_multi-property_entities		2.373%	1.331%	3.515%
sample_entity	sample_entity_whole_population	10000	1.951%	1.415%	2.670%
sample_entity	sample_entity_multi_property_indexed	100000	1.666%	1.190%	2.129%
counts	multi_property_indexed_entities		1.579%	1.212%	1.850%
sampling	count_and_sampling_single_unindexed_concrete_plus_derived_entiti		1.458%	1.234%	1.685%
indexing	query_people_count_multiple_individually_indexed_properties_enti		1.379%	1.125%	1.613%

Improvements (faster)

Group	Bench	Param	Change	CI Lower	CI Upper
counts	single_property_indexed_entities		-24.284%	-26.526%	-22.051%
large_dataset	bench_query_population_derived_property_entities		-15.281%	-15.615%	-14.934%
large_dataset	bench_match_entity		-12.971%	-15.054%	-10.897%
sample_entity	sample_entity_single_property_unindexed	1000	-12.415%	-14.874%	-9.869%
large_dataset	bench_filter_unindexed_entity		-9.202%	-13.659%	-4.732%
large_dataset	bench_query_population_indexed_property_entities		-5.785%	-8.607%	-2.217%
sampling	sampling_single_known_length_entities		-3.715%	-5.895%	-1.954%
sampling	count_and_sampling_single_known_length_entities		-3.523%	-4.271%	-2.737%
sample_entity	sample_entity_whole_population	1000	-2.979%	-3.742%	-2.462%
sampling	sampling_multiple_l_reservoir_entities		-2.553%	-3.063%	-2.081%
sampling	sampling_single_l_reservoir_entities		-2.036%	-2.820%	-1.286%
sampling	sampling_multiple_known_length_entities		-2.027%	-2.883%	-1.102%
indexing	with_query_results_single_indexed_property_entities		-1.934%	-2.495%	-1.331%
sample_entity	sample_entity_single_property_indexed	10000	-1.747%	-2.282%	-1.354%
algorithm_benches	algorithm_sampling_multiple_l_reservoir		-1.734%	-2.171%	-1.330%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
large_dataset	bench_filter_indexed_entity		-5.374%	-14.903%	6.449%
sample_entity	sample_entity_multi_property_indexed	10000	1.628%	0.985%	2.228%
sample_entity	sample_entity_single_property_indexed	100000	-1.346%	-1.831%	-0.858%
sample_entity	sample_entity_single_property_unindexed	10000	-1.345%	-3.958%	1.519%
indexing	query_people_count_indexed_multi-property_entities		-1.296%	-1.711%	-0.901%
sample_entity	sample_entity_whole_population	100000	1.227%	0.929%	1.629%
sample_entity	sample_entity_single_property_indexed	1000	-1.162%	-1.648%	-0.835%
examples	example-births-deaths		1.089%	0.811%	1.316%
sampling	sampling_single_unindexed_concrete_plus_derived_entities		-1.054%	-1.468%	-0.630%
indexing	query_people_count_single_indexed_property_entities		-1.019%	-1.412%	-0.731%
counts	concrete_plus_derived_unindexed_entities		-1.000%	-1.427%	-0.539%
counts	multi_property_unindexed_entities		0.999%	0.776%	1.218%
indexing	with_query_results_indexed_multi-property_entities		0.922%	0.749%	1.079%
counts	index_after_adding_entities		0.873%	0.692%	1.089%
counts	reindex_after_adding_more_entities		0.851%	0.581%	1.089%
algorithm_benches	algorithm_sampling_multiple_known_length		-0.797%	-1.137%	-0.547%
sampling	sampling_single_unindexed_entities		-0.712%	-0.827%	-0.575%
sampling	sampling_multiple_unindexed_entities		-0.438%	-0.673%	-0.194%
sample_entity	sample_entity_single_property_unindexed	100000	-0.410%	-0.674%	-0.176%
indexing	query_people_multiple_individually_indexed_properties_entities		-0.198%	-0.540%	0.179%
algorithm_benches	algorithm_sampling_single_l_reservoir		-0.174%	-0.430%	0.119%
algorithm_benches	algorithm_sampling_single_rand_reservoir		-0.146%	-0.444%	0.074%
large_dataset	bench_query_population_property_entities		-0.121%	-0.526%	0.161%
counts	single_property_unindexed_entities		-0.083%	-0.368%	0.231%
large_dataset	bench_query_population_multi_unindexed_entities		0.078%	-0.351%	0.380%

[github-actions]

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
large_sir::baseline	3.0 ± 0.1	2.8	3.1	1.00
large_sir::entities	6.6 ± 0.1	6.4	6.9	2.23 ± 0.05

Criterion

Regressions (slower)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	sample_entity_single_property_unindexed	1000	21.575%	19.144%	23.822%
large_dataset	bench_filter_unindexed_entity		16.468%	10.466%	23.089%
sample_entity	sample_entity_whole_population	1000	15.660%	14.801%	16.275%
sample_entity	sample_entity_whole_population	10000	15.182%	14.948%	15.396%
sample_entity	sample_entity_whole_population	100000	15.133%	14.548%	15.737%
large_dataset	bench_match_entity		9.821%	8.925%	11.185%
indexing	query_people_count_indexed_multi-property_entities		7.391%	6.510%	8.202%
large_dataset	bench_query_population_multi_indexed_entities		6.648%	6.331%	7.072%
sample_entity	sample_entity_multi_property_indexed	1000	4.131%	3.698%	4.597%
sampling	sampling_single_unindexed_concrete_plus_derived_entities		3.408%	3.135%	3.751%
sample_entity	sample_entity_multi_property_indexed	100000	3.261%	2.973%	3.678%
sample_entity	sample_entity_multi_property_indexed	10000	3.119%	2.720%	3.427%
counts	index_after_adding_entities		3.022%	2.052%	4.707%
sampling	count_and_sampling_single_unindexed_concrete_plus_derived_entiti		2.476%	2.237%	2.629%
sampling	sampling_single_unindexed_entities		1.665%	1.315%	1.913%

Improvements (faster)

Group	Bench	Param	Change	CI Lower	CI Upper
indexing	query_people_single_indexed_property_entities		-6.752%	-7.950%	-5.236%
large_dataset	bench_query_population_property_entities		-6.285%	-7.639%	-4.952%
sampling	sampling_single_l_reservoir_entities		-4.174%	-4.735%	-3.736%
indexing	query_people_count_single_indexed_property_entities		-3.833%	-4.266%	-3.400%
algorithm_benches	algorithm_sampling_multiple_known_length		-3.253%	-3.895%	-2.617%
large_dataset	bench_query_population_indexed_property_entities		-2.821%	-3.302%	-2.242%
algorithm_benches	algorithm_sampling_multiple_l_reservoir		-2.642%	-3.247%	-2.185%
indexing	with_query_results_single_indexed_property_entities		-2.369%	-2.802%	-2.041%
indexing	with_query_results_indexed_multi-property_entities		-2.084%	-2.896%	-1.442%
sample_entity	sample_entity_single_property_indexed	1000	-1.974%	-2.791%	-1.241%
sampling	sampling_multiple_unindexed_entities		-1.812%	-1.874%	-1.760%
sample_entity	sample_entity_single_property_unindexed	100000	-1.643%	-2.412%	-1.163%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
examples	example-basic-infection		3.889%	-1.560%	8.753%
sample_entity	sample_entity_single_property_unindexed	10000	2.327%	0.909%	3.941%
sample_entity	sample_entity_single_property_indexed	10000	-1.473%	-1.861%	-0.941%
sampling	count_and_sampling_single_known_length_entities		-1.210%	-1.769%	-0.734%
counts	concrete_plus_derived_unindexed_entities		-1.085%	-2.572%	0.161%
sampling	sampling_multiple_known_length_entities		-1.017%	-1.283%	-0.757%
counts	multi_property_indexed_entities		-0.946%	-1.121%	-0.760%
indexing	query_people_indexed_multi-property_entities		-0.787%	-1.136%	-0.537%
sample_entity	sample_entity_single_property_indexed	100000	-0.782%	-1.011%	-0.548%
large_dataset	bench_query_population_multi_unindexed_entities		-0.720%	-1.322%	-0.166%
indexing	query_people_count_multiple_individually_indexed_properties_enti		-0.697%	-0.868%	-0.543%
sampling	sampling_single_known_length_entities		-0.623%	-1.775%	0.705%
algorithm_benches	algorithm_sampling_single_l_reservoir		-0.552%	-0.705%	-0.405%
large_dataset	bench_query_population_derived_property_entities		-0.546%	-1.756%	0.417%
counts	single_property_indexed_entities		0.520%	-0.373%	1.411%
examples	example-births-deaths		0.460%	-0.138%	1.133%
sampling	sampling_multiple_l_reservoir_entities		-0.424%	-1.045%	0.474%
indexing	query_people_multiple_individually_indexed_properties_entities		-0.399%	-0.562%	-0.251%
counts	multi_property_unindexed_entities		0.398%	-0.303%	1.258%
counts	reindex_after_adding_more_entities		0.347%	0.089%	0.604%
counts	single_property_unindexed_entities		-0.221%	-0.858%	0.401%
large_dataset	bench_filter_indexed_entity		-0.179%	-12.826%	13.269%
indexing	with_query_results_multiple_individually_indexed_properties_enti		0.151%	-0.119%	0.379%
algorithm_benches	algorithm_sampling_single_known_length		-0.104%	-0.582%	0.303%
algorithm_benches	algorithm_sampling_single_rand_reservoir		-0.072%	-0.454%	0.258%

[k88hudson-cfa]

LGTM