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@chop-dbhi

DBHi

Department of Biomedical and Health Informatics

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  1. prometheus-sql prometheus-sql Public

    Service that exposes Prometheus metrics for a SQL result set.

    Go 204 54

  2. sql-agent sql-agent Public

    HTTP interface for executing ad-hoc SQL queries.

    Go 94 23

  3. dataexpress dataexpress Public

    [NOT MAINTAINED] DataExpress is a simple, Scala-based cross database ETL toolkit supporting Postgres, MySql, Oracle, SQLServer, and Sqlite

    Scala 73 10

  4. dicom-anon dicom-anon Public

    Python DICOM Anonymizer

    Python 67 22

  5. avocado avocado Public archive

    Metadata APIs for Django

    Python 41 10

  6. origins origins Public

    Origins is an open source bi-temporal database for storing and retrieving facts for slowly-changing data. It support "time travel" queries and has built-in change detection.

    Go 39 5

Repositories

Showing 10 of 168 repositories
  • data-models Public

    Collection of various biomedical data models in parseable formats.

    chop-dbhi/data-models’s past year of commit activity
    29 8 17 (2 issues need help) 0 Updated Jan 5, 2026
  • smart-asthma Public

    Service for the SMART Asthma EHR-integrated system.

    chop-dbhi/smart-asthma’s past year of commit activity
    Go 0 0 0 0 Updated Jun 4, 2025
  • chop-dbhi/visual-search-strat-cluster’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jun 2, 2025
  • ecease-smart-app Public

    EHR integrated SMART app for the eCEASE project

    chop-dbhi/ecease-smart-app’s past year of commit activity
    JavaScript 0 0 0 0 Updated May 30, 2025
  • dr-trace Public

    HTTP request trace capture and analysis

    chop-dbhi/dr-trace’s past year of commit activity
    Go 0 0 0 0 Updated May 30, 2025
  • sql-agent Public

    HTTP interface for executing ad-hoc SQL queries.

    chop-dbhi/sql-agent’s past year of commit activity
    Go 94 BSD-2-Clause 23 10 (3 issues need help) 0 Updated Jul 5, 2023
  • data-models-sqlalchemy Public

    SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.

    chop-dbhi/data-models-sqlalchemy’s past year of commit activity
    Python 11 3 7 1 Updated May 22, 2023
  • infomodels Public Forked from infomodels/infomodels

    One CLI to rule them all.

    chop-dbhi/infomodels’s past year of commit activity
    Go 0 2 0 0 Updated May 17, 2023
  • GGIR Public Forked from wadpac/GGIR

    Code corresponding to R package GGIR

    chop-dbhi/GGIR’s past year of commit activity
    R 0 LGPL-3.0 72 0 0 Updated May 9, 2023
  • vscode-multiline-string-editor Public

    Edit multiline strings that need to be encoded as single-line strings (for example, JSON strings that contain literal `\n` characters) in Visual Studio Code.

    chop-dbhi/vscode-multiline-string-editor’s past year of commit activity
    TypeScript 5 5 2 2 Updated Apr 1, 2023

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